Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001438annotation not available (105 aa)    
Predicted Functional Partners:
ENSSCAP00000021070
annotation not available
 
     0.890
ENSSCAP00000007229
annotation not available
  
     0.541
CTRC
Chymotrypsin C.
  
     0.538
ENSSCAP00000007378
annotation not available
  
     0.536
ENSSCAP00000017876
annotation not available
  
     0.532
ENSSCAP00000004159
LOW QUALITY PROTEIN: proproteinase E-like.
  
     0.531
LOC103820951
Chymotrypsin-like elastase family member 2A.
  
     0.530
PRSS55
Serine protease 55.
  
     0.520
LOC103822021
Granzyme K-like.
  
     0.512
ENSSCAP00000007239
LOW QUALITY PROTEIN: acrosin-like.
  
     0.477
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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