STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOE1Target of EGR1 protein 1. (498 aa)    
Predicted Functional Partners:
DCP2
M7GpppN-mRNA hydrolase isoform X1.
     
 0.637
GEMIN8
Gem-associated protein 8 isoform X1.
      
 0.620
SNUPN
Snurportin-1.
    
 
 0.552
ENSSCAP00000014343
annotation not available
   
  
 0.550
PAN2
PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X2.
      
 0.542
MUTYH
Adenine DNA glycosylase isoform X1.
      
 0.539
GEMIN5
Gem associated protein 5.
      
 0.516
EXOSC8
Exosome complex component RRP43.
     
 0.462
EXOSC9
Exosome complex component RRP45.
   
 
 0.451
PNLDC1
Poly(A)-specific ribonuclease PNLDC1 isoform X1.
      
0.441
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.