STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A1Solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1. (488 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 (neutral and basic amino acid transporter), member 1.
   
 
 0.750
ARL6IP5
PRA1 family protein 3.
    
 
 0.732
SLC15A1
Solute carrier family 15 (oligopeptide transporter), member 1.
   
 
 0.705
SLC7A5
Solute carrier family 7 (L-type amino acid transporter), member 5.
  
 
 0.697
SLC39A6
Solute carrier family 39 (zinc transporter), member 6.
  
 
 0.693
SLC7A1
Solute carrier family 7 (cationic amino acid transporter), member 1.
  
 
 0.686
SLC38A4
Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 4.
      
 0.685
SLC2A2
MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 2.
   
  
 0.616
SLC2A1
MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 1.
   
  
 0.603
SLC6A19
Solute carrier family 6 (neurotransmitter transporter) member 19.
  
  
 0.603
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.