STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A1Solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1. (488 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 (neutral and basic amino acid transporter), member 1.
   
 
 0.604
ARL6IP5
PRA1 family protein 3.
    
 
 0.568
SLC39A6
Solute carrier family 39 (zinc transporter), member 6.
  
 
 0.554
SLC15A1
Solute carrier family 15 (oligopeptide transporter), member 1.
   
 
 0.553
SLC7A5
Solute carrier family 7 (L-type amino acid transporter), member 5.
  
  
 0.544
SLC38A4
Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 4.
    
 
 0.542
SLC7A1
Solute carrier family 7 (cationic amino acid transporter), member 1.
     
 0.526
LOC103827199
MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 3.
   
  
 0.484
SLC38A2
Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2.
    
 
 0.475
SLC2A1
MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 1.
   
  
 0.474
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.