STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNISRSplicing factor, arginine/serine-rich 18. (824 aa)    
Predicted Functional Partners:
LUC7L3
Luc7-like protein 3 isoform X1.
   
 
 0.942
PNN
Pinin.
   
 
 0.866
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 0.806
PRPF39
Pre-mRNA-processing factor 39 isoform X1.
   
  
 0.740
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
   
 0.732
NKTR
NK-tumor recognition protein isoform X5.
  
  0.730
ACTL6A
Actin-like protein 6A.
    
 0.725
PBRM1
Protein polybromo-1 isoform X1.
    
 0.709
SMARCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
    
 0.694
TTC14
Tetratricopeptide repeat protein 14 isoform X1.
   
  0.633
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.