STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC14L2SEC14-like protein 2 isoform X1. (499 aa)    
Predicted Functional Partners:
PLD1
Phospholipase D1 isoform X1.
   
 
 0.572
SESTD1
SEC14 domain and spectrin repeat-containing protein 1.
      
 0.528
SCARB1
Scavenger receptor class B member 1 isoform X3.
   
  
 0.496
PPTC7
Protein phosphatase PTC7 homolog.
   
   0.483
PCYT1A
Choline-phosphate cytidylyltransferase A.
    
 
 0.413
PCYT1B
Phosphate cytidylyltransferase 1, choline, beta.
    
 
 0.413
PI4KB
LOW QUALITY PROTEIN: phosphatidylinositol 4-kinase beta.
    
 
 0.405
TPPP3
Tubulin polymerization-promoting protein family member 3.
      
 0.404
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.