STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFMBT1Scm-like with four MBT domains protein 1. (867 aa)    
Predicted Functional Partners:
KDM2A
LOW QUALITY PROTEIN: lysine-specific demethylase 2A.
    
 0.649
KDM2B
F-box and leucine-rich repeat protein 10/11.
    
 0.649
RYBP
RING1 and YY1-binding protein.
    
 0.625
YAF2
YY1-associated factor 2.
    
 0.625
RNF2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.576
KDM6A
Lysine-specific demethylase 6A isoform X3.
    
 0.502
BARD1
BRCA1-associated RING domain protein 1 isoform X1.
    
  0.473
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.443
EED
Polycomb protein EED.
   
 0.442
PCGF5
Polycomb group RING finger protein 5 isoform X1.
   
 0.431
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.