Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
USP35Ubiquitin carboxyl-terminal hydrolase 35/38. (982 aa)    
Predicted Functional Partners:
WDR48
WD repeat-containing protein 48 isoform X2.
    
 0.748
INPP4B
Inositol polyphosphate 4-phosphatase type II.
      
 0.590
ENSSCAP00000000212
annotation not available
   
 0.578
WDR20
WD repeat-containing protein 20 isoform X1.
   
 0.578
STING1
Stimulator of interferon genes protein isoform X1.
    
 
 0.574
MAVS
Mitochondrial antiviral-signaling protein.
    
   0.572
HHIP
Hedgehog interacting protein.
      
 0.556
ANAPC10
Anaphase-promoting complex subunit 10.
      
 0.553
PCNA
Proliferating cell nuclear antigen.
   
 0.547
USP30
Ubiquitin carboxyl-terminal hydrolase 30.
      
 0.534
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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