STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMACRLOW QUALITY PROTEIN: alpha-methylacyl-CoA racemase. (387 aa)    
Predicted Functional Partners:
ACOX2
3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase.
  
 
 0.981
HSDL2
Hydroxysteroid dehydrogenase-like protein 2 isoform X1.
  
 0.868
EHHADH
Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase.
  
 
 0.778
ACAA1
LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.
  
 
 0.773
RAI1
Retinoic acid induced 1.
      
 0.769
SCP2
Non-specific lipid-transfer protein.
 
 
 0.739
HACL1
2-hydroxyacyl-CoA lyase 1.
  
 
 0.711
PEX14
Peroxisomal membrane protein PEX14.
     
 0.706
PECR
Peroxisomal trans-2-enoyl-CoA reductase.
   
 0.705
CROT
Peroxisomal carnitine O-octanoyltransferase.
     
 0.694
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.