Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GCNT1Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase. (426 aa)    
Predicted Functional Partners:
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X3.
    
 0.964
C1GALT1C1
C1GALT1-specific chaperone 1.
    
 0.946
ST6GALNAC1
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7A).
     
 0.944
GALNT12
Polypeptide N-acetylgalactosaminyltransferase 12.
     
 0.941
ST3GAL2
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2.
     
 0.939
ST3GAL1
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1.
     
 0.939
GALNT6
Polypeptide N-acetylgalactosaminyltransferase 6.
     
 0.938
GALNT3
Polypeptide N-acetylgalactosaminyltransferase 3 isoform X1.
     
 0.938
ST6GALNAC2
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7B).
     
 0.929
GALNT14
Polypeptide N-acetylgalactosaminyltransferase 14 isoform X3.
     
 0.929
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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