STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCNT1Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase. (426 aa)    
Predicted Functional Partners:
GALNT12
Polypeptide N-acetylgalactosaminyltransferase 12.
     
 0.931
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X3.
   
 0.928
GALNT18
Polypeptide N-acetylgalactosaminyltransferase 18.
     
 0.927
ST6GALNAC1
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7A).
   
 
 0.923
GALNT2
Polypeptide N-acetylgalactosaminyltransferase 2.
     
 0.922
GALNT6
Polypeptide N-acetylgalactosaminyltransferase 6.
     
 0.922
GALNT3
Polypeptide N-acetylgalactosaminyltransferase 3 isoform X1.
     
 0.922
C1GALT1C1
C1GALT1-specific chaperone 1.
    
 0.918
ST3GAL1
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1.
     
 0.914
GALNT14
Polypeptide N-acetylgalactosaminyltransferase 14 isoform X3.
     
 0.914
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.