STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLDCGlycine dehydrogenase (decarboxylating), mitochondrial. (943 aa)    
Predicted Functional Partners:
GCSH
Glycine cleavage system H protein, mitochondrial.
 
 0.999
AMT
Aminomethyltransferase, mitochondrial.
 0.999
DLD
Dihydrolipoyl dehydrogenase, mitochondrial.
  
 0.997
SHMT1
Serine hydroxymethyltransferase, cytosolic.
  
 
 0.995
MTHFR
Methylenetetrahydrofolate reductase isoform X1.
  
 
 0.987
SARDH
Sarcosine dehydrogenase, mitochondrial.
  
 0.986
ENSSCAP00000015369
Probable low-specificity L-threonine aldolase 2 isoform X1.
    
 0.985
MTHFD2L
Methylenetetrahydrofolate dehydrogenase(NAD+) / 5,10-methenyltetrahydrofolate cyclohydrolase.
  
 
 0.982
TYMS
Thymidylate synthase.
    
 0.982
MTHFD2
Methylenetetrahydrofolate dehydrogenase(NAD+) / 5,10-methenyltetrahydrofolate cyclohydrolase.
  
 
 0.982
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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