STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMACHCCyanocobalamin reductase (cyanide-eliminating) / alkylcobalamin dealkylase. (270 aa)    
Predicted Functional Partners:
MMADHC
Methylmalonic aciduria and homocystinuria type D protein, mitochondrial.
    
 0.996
MTR
5-methyltetrahydrofolate--homocysteine methyltransferase.
   
 0.868
MTRR
Methionine synthase reductase isoform X1.
     
 0.780
LMBRD1
Probable lysosomal cobalamin transporter.
      
 0.721
MMAA
Methylmalonic aciduria type A protein, mitochondrial.
      
 0.714
MMAB
Cob(I)alamin adenosyltransferase.
     
 0.701
DGKE
Diacylglycerol kinase epsilon.
      
 0.701
MMUT
Methylmalonyl-CoA mutase, mitochondrial.
      
 0.685
C6orf58
Protein LEG1 homolog.
      
 0.609
RNF146
E3 ubiquitin-protein ligase RNF146.
      
 0.603
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.