STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFKLOW QUALITY PROTEIN: riboflavin kinase. (210 aa)    
Predicted Functional Partners:
FLAD1
FAD synthase isoform X1.
    
 0.994
ACP1
Low molecular weight phosphotyrosine protein phosphatase.
    
  0.906
ACP2
Lysosomal acid phosphatase.
     
  0.900
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase family member 1/3.
    
  0.900
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
    
  0.900
IYD
Iodotyrosine deiodinase 1 isoform X1.
    
 0.840
TNFRSF1A
Tumor necrosis factor receptor superfamily member 1A isoform X2.
    
 
 0.690
TRMT5
TRNA (guanine(37)-N1)-methyltransferase isoform X1.
      
 0.684
METAP1D
Methionine aminopeptidase 1D, mitochondrial.
     
  0.648
TRMU
Mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2.
  
 
 0.628
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.