Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPS18BSmall subunit ribosomal protein S18b, mitochondrial. (221 aa)    
Predicted Functional Partners:
MRPS31
Mitochondrial ribosomal protein S31.
   
 0.993
MRPS22
28S ribosomal protein S22, mitochondrial.
   
 0.993
MRPS6
28S ribosomal protein S6, mitochondrial.
   
 0.992
MRPS9
28S ribosomal protein S9, mitochondrial.
   
 0.991
MRPS2
Mitochondrial ribosomal protein S2.
   
 0.990
MRPS18A
39S ribosomal protein S18a, mitochondrial.
   
 0.988
MRPS27
28S ribosomal protein S27, mitochondrial.
   
 0.987
MRPS26
28S ribosomal protein S26, mitochondrial.
   
 0.985
MRPS14
28S ribosomal protein S14, mitochondrial.
   
 0.985
MRPS35
28S ribosomal protein S35, mitochondrial.
   
 0.984
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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