STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP3Sentrin-specific protease 3. (305 aa)    
Predicted Functional Partners:
LAS1L
Ribosomal biogenesis protein LAS1L.
   
 0.882
TEX10
Testis-expressed protein 10 homolog isoform X2.
   
 0.868
WDR18
Pre-rRNA-processing protein IPI3.
    
 0.865
SUMO1
Small ubiquitin-related modifier 1.
   
 0.833
NOL9
Nucleolar protein 9.
   
 0.827
SENP6
Sentrin-specific protease 6 isoform X1.
   
 0.764
NUP133
Nuclear pore complex protein Nup133.
   
 
 0.676
SUMO2
Small ubiquitin-related modifier 2.
   
 0.634
KPNB1
Karyopherin subunit beta 1.
   
 
 0.630
ENSSCAP00000000737
annotation not available
   
 0.624
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.