STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDX1Peroxiredoxin 1. (199 aa)    
Predicted Functional Partners:
SRXN1
Sulfiredoxin-1.
   
 0.922
TXN2
Thioredoxin, mitochondrial.
  
 0.898
TXN
Thioredoxin 1.
  
 0.886
ENSSCAP00000014214
annotation not available
  
 0.808
NME8
Thioredoxin domain-containing protein 3.
  
 0.808
CAT
Catalase.
  
 
 0.656
ENSSCAP00000022395
annotation not available
  
 0.640
SOD2
Superoxide dismutase [Mn], mitochondrial isoform X1.
  
 
 0.633
DNAJC10
DnaJ homolog subfamily C member 10.
  
 0.609
TXNDC5
Thioredoxin domain-containing protein 5.
  
 0.583
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.