STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDX1Peroxiredoxin 1. (199 aa)    
Predicted Functional Partners:
SRXN1
Sulfiredoxin-1.
   
 0.987
TXN
Thioredoxin 1.
  
 0.973
PRDX4
Peroxiredoxin 4.
   
   0.859
TXN2
Thioredoxin, mitochondrial.
  
 0.828
ENSSCAP00000014214
annotation not available
  
 0.811
NME8
Thioredoxin domain-containing protein 3.
  
 0.811
PRDX3
Peroxiredoxin 3.
   
   0.707
DNAJB13
DnaJ homolog subfamily B member 13.
   
 0.686
PLTP
Phospholipid transfer protein.
      
 0.684
SESN1
Sestrin-1 isoform X1.
    
 0.669
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.