STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCKDHA2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial. (265 aa)    
Predicted Functional Partners:
BCKDHB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
 
 0.998
DBT
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
 
 0.969
PPM1K
Protein phosphatase 1K, mitochondrial.
   
 0.965
DLD
Dihydrolipoyl dehydrogenase, mitochondrial.
  
 
 0.963
PDHB
Pyruvate dehydrogenase E1 component subunit beta, mitochondrial.
  
 0.931
BCAT1
Branched-chain-amino-acid aminotransferase, cytosolic isoform X1.
  
 
 0.930
ACADSB
Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 
 0.836
HACL1
2-hydroxyacyl-CoA lyase 1.
  
 
 0.827
PDHX
Dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex.
  
 0.826
GPI
Glucose-6-phosphate isomerase.
    
 0.822
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.