STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDST4Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4. (815 aa)    
Predicted Functional Partners:
ARMC3
Armadillo repeat-containing protein 3.
      
 0.497
CSGALNACT1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1/2.
   
  
 0.477
ZMYND10
Zinc finger MYND domain-containing protein 10.
   
  
 0.474
EXT2
Glucuronyl/N-acetylglucosaminyl transferase EXT2.
    
 
 0.465
SDC1
Syndecan 1.
     
 0.462
LEPROTL1
Leptin receptor overlapping transcript-like 1.
      
 0.457
GLCE
Heparosan-N-sulfate-glucuronate 5-epimerase.
   
 
 0.444
NR3C2
Mineralocorticoid receptor isoform X1.
      
 0.440
LOC103815703
Glypican-5-like.
    
 0.400
GPC5
Glypican 5.
    
 0.400
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.