STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPTBN5Spectrin beta chain, non-erythrocytic 5. (3345 aa)    
Predicted Functional Partners:
SPTBN1
Spectrin beta chain, non-erythrocytic 1 isoform X2.
     
 
0.903
SPTAN1
Spectrin alpha chain, non-erythrocytic 1 isoform X1.
   
 0.866
ADD2
Adducin 2.
    
 
 0.600
ENSSCAP00000015155
annotation not available
   
 
 0.517
COPB1
Coatomer subunit beta.
    
 0.453
COPB2
Coatomer subunit beta' isoform X1.
     
 0.452
ANK3
Ankyrin-3 isoform X1.
   
 0.442
ANK2
Ankyrin-2 isoform X1.
   
 0.442
ANK1
Ankyrin 1.
   
 0.442
ACTR10
Actin-related protein 10.
    
 0.439
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.