STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PINK1PTEN induced kinase 1. (535 aa)    
Predicted Functional Partners:
PRKN
E3 ubiquitin-protein ligase parkin isoform X2.
    
 0.998
TOMM20
LOW QUALITY PROTEIN: mitochondrial import receptor subunit TOM20 homolog.
    
 0.994
TOMM7
Mitochondrial import receptor subunit TOM7 homolog.
    
 0.977
LOC103825092
Mitochondrial import receptor subunit TOM40 homolog.
    
 0.976
AMBRA1
Activating molecule in BECN1-regulated autophagy protein 1 isoform X1.
    
 0.970
TOMM70
LOW QUALITY PROTEIN: mitochondrial import receptor subunit TOM70.
    
 0.967
BECN1
Beclin-1.
     
 0.966
MFN2
Mitofusin 2.
   
 0.961
BCL2L1
Bcl-2-like 1 (apoptosis regulator Bcl-X).
    
 0.961
ENSSCAP00000001787
annotation not available
    
 0.959
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.