STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103819438Solute carrier family 27 (fatty acid transporter), member 6. (618 aa)    
Predicted Functional Partners:
SLC27A4
Solute carrier family 27 (fatty acid transporter), member 1/4.
  
  
 
0.907
SLC27A6
Solute carrier family 27 (fatty acid transporter), member 6.
  
  
 
0.902
BBS9
Bardet-Biedl syndrome 9 protein.
   
 0.727
BBS7
Bardet-Biedl syndrome 7 protein.
    
 0.725
BBS4
Bardet-Biedl syndrome 4 protein isoform X1.
    
 0.700
TTC8
Tetratricopeptide repeat protein 8.
    
 0.684
ACOX1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
   
 
 0.613
SCP2
Non-specific lipid-transfer protein.
   
 
 0.613
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
   
 
 0.586
ENSSCAP00000010212
annotation not available
   
 0.570
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.