STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMS22LMMS22 like, DNA repair protein. (1155 aa)    
Predicted Functional Partners:
SSRP1
Structure-specific recognition protein 1.
    
 0.935
MCM2
DNA replication licensing factor MCM2.
   
 0.911
ASF1A
Histone chaperone ASF1A.
   
 
 0.826
MCM6
DNA replication licensing factor MCM6.
   
 0.762
TAMM41
Mitochondrial translocator assembly and maintenance protein 41.
      
 0.705
KLHL32
Kelch-like protein 32.
      
 0.693
HIVEP3
Human immunodeficiency virus type I enhancer-binding protein.
      
 0.685
GJA9
Gap junction alpha-9 protein.
      
 0.685
STXBP6
Syntaxin-binding protein 6 isoform X1.
      
 0.684
BRCA1
Breast cancer type 1 susceptibility protein isoform X2.
   
 
 0.670
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.