STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM43BProtein FAM43B. (276 aa)    
Predicted Functional Partners:
SCLY
Selenocysteine lyase isoform X1.
      
 0.609
PLEKHH2
Pleckstrin homology domain-containing family H member 2 isoform X1.
      
 0.528
SNX29
Sorting nexin-29.
      
 0.508
PANX3
Pannexin 2/3.
      
 0.477
OSTN
Osteocrin isoform X2.
      
 0.473
XXYLT1
Xyloside xylosyltransferase 1 isoform X1.
      
 0.471
ENSSCAP00000020098
Protein FAM13A-like.
      
 0.469
FAM13A
Protein FAM13A isoform X1.
      
 0.469
TPRA1
Transmembrane protein adipocyte-associated 1.
      
 0.453
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit.
      
 0.440
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.