Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MUL1LOW QUALITY PROTEIN: mitochondrial ubiquitin ligase activator of NFKB 1. (249 aa)    
Predicted Functional Partners:
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
  0.963
FKBP8
FKBP prolyl isomerase 8.
     
 0.956
TOMM70
LOW QUALITY PROTEIN: mitochondrial import receptor subunit TOM70.
     
 0.953
MFN2
Mitofusin 2.
    
 0.950
MFN1
Mitofusin 1.
    
 0.938
RHOT1
Ras homolog family member T1.
     
 0.929
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
     
  0.928
GABARAPL1
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
 0.915
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
 0.910
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
    
 0.904
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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