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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MUL1LOW QUALITY PROTEIN: mitochondrial ubiquitin ligase activator of NFKB 1. (249 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
  0.936
USP30
Ubiquitin carboxyl-terminal hydrolase 30.
     
 0.678
TMEM115
Transmembrane protein 115.
   
    0.587
NR6A1
Nuclear receptor subfamily 6 group A member 1.
    
 
 0.572
UBE2D1
Ubiquitin-conjugating enzyme E2 D1 isoform X1.
    
 
 0.545
UBE2D2
Ubiquitin-conjugating enzyme E2 D2.
    
 
 0.545
UBE2D3
Ubiquitin-conjugating enzyme E2 D3 isoform X1.
    
 
 0.545
TOMM70
LOW QUALITY PROTEIN: mitochondrial import receptor subunit TOM70.
     
 0.543
VDAC1
Voltage-dependent anion-selective channel protein 1.
     
 0.521
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
  0.501
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.