STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCHR1Melanin-concentrating hormone receptor 1 isoform X1. (368 aa)    
Predicted Functional Partners:
PMCH
Pro-melanin-concentrating hormone.
     
 0.986
POMC
Pro-opiomelanocortin.
    
 0.691
BBS2
Bardet-Biedl syndrome 2 protein isoform X1.
     
 0.667
BBS4
Bardet-Biedl syndrome 4 protein isoform X1.
     
 0.612
BBS7
Bardet-Biedl syndrome 7 protein.
     
 0.574
TRH
Thyrotropin releasing hormone.
     
 0.539
APLN
Apelin.
     
 0.528
SMO
Smoothened, frizzled class receptor.
     
 0.519
UTS2
Urotensin 2.
   
 
 0.511
BBS9
Bardet-Biedl syndrome 9 protein.
     
 0.498
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.