STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UHRF2E3 ubiquitin-protein ligase UHRF2 isoform X1. (807 aa)    
Predicted Functional Partners:
DNMT1
DNA methyltransferase 1.
   
 0.951
PCNA
Proliferating cell nuclear antigen.
   
 
 0.772
USP7
Ubiquitin carboxyl-terminal hydrolase 7 isoform X2.
    
 
 0.769
ENSSCAP00000022096
annotation not available
   
 
 0.737
DNMT3B
DNA (cytosine-5)-methyltransferase 3B isoform X1.
   
 0.694
EHMT1
Histone-lysine N-methyltransferase EHMT1 isoform X1.
    
 
 0.679
BTRC
F-box/WD repeat-containing protein 1A isoform X1.
    
 
 0.626
PCNP
PEST proteolytic signal-containing nuclear protein.
    
 
 0.623
CDYL
Chromodomain Y-like protein isoform X1.
      
 0.614
KIF2C
Kinesin-like protein KIF2C isoform X1.
   
  
 0.597
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.