Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB1Activated RNA polymerase II transcriptional coactivator p15. (126 aa)    
Predicted Functional Partners:
GTF2B
Transcription initiation factor IIB isoform X1.
    
 
 0.627
CNBP
CCHC-type zinc finger nucleic acid binding protein.
   
 
 0.601
TMEM51
Transmembrane protein 51.
      
 0.528
SPATS2L
SPATS2-like protein.
      
 0.522
SLC2A13
MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13.
      
 0.494
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.491
GTF3C1
LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 1.
    
 
 0.481
EP300
Histone acetyltransferase p300.
    
   0.469
UBR5
E3 ubiquitin-protein ligase EDD1.
    
   0.469
SP1
Transcription factor Sp1.
    
   0.469
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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