STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1L1Actin filament-associated protein 1-like 1 isoform X1. (771 aa)    
Predicted Functional Partners:
VPS53
Vacuolar protein sorting-associated protein 53 homolog isoform X1.
      
 0.865
GADD45G
Growth arrest and DNA damage inducible gamma.
    
   0.840
RPH3AL
Rab effector Noc2 isoform X1.
      
 0.703
ENSSCAP00000014343
annotation not available
      
 0.701
GRPEL2
GrpE protein homolog 2, mitochondrial isoform X1.
      
 0.665
CNTN6
Contactin 6.
      
 0.663
TBC1D8B
TBC1 domain family member 8/9.
      
 0.552
HS3ST4
Heparan sulfate glucosamine 3-O-sulfotransferase 4.
      
 0.539
RCBTB2
RCC1 and BTB domain-containing protein 2.
      
 0.532
ABLIM3
Actin binding LIM protein family member 3.
   
  
 0.530
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.