STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001630annotation not available (920 aa)    
Predicted Functional Partners:
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.970
ABRAXAS1
BRCA1-A complex subunit Abraxas 1 isoform X3.
    
 0.968
BABAM2
BRISC and BRCA1-A complex member 2 isoform X1.
    
 0.960
BRCA1
Breast cancer type 1 susceptibility protein isoform X2.
    
 0.937
BARD1
BRCA1-associated RING domain protein 1 isoform X1.
    
 0.928
ENSSCAP00000001626
annotation not available
 
     0.886
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.838
PAXIP1
LOW QUALITY PROTEIN: PAX-interacting protein 1.
    
 0.794
MDC1
Mediator of DNA damage checkpoint protein 1 isoform X2.
    
 0.794
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.766
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.