Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103814987Riboflavin-binding protein-like. (241 aa)    
Predicted Functional Partners:
RAD18
E3 ubiquitin-protein ligase RAD18 isoform X1.
      
 0.520
LOC103817344
Ovoinhibitor-like.
      
 0.510
LOC103814932
Vitellogenin-1-like.
      
 0.464
LOC103817346
Ovomucoid-like.
      
 0.463
LOC103817347
Ovoinhibitor-like isoform X1.
      
 0.445
RAD17
Cell cycle checkpoint protein RAD17 isoform X2.
      
 0.435
ENSSCAP00000019646
annotation not available
      
 0.435
LOC103813448
Cathepsin E-like isoform X1.
      
 0.434
FANCL
E3 ubiquitin-protein ligase FANCL isoform X1.
      
 0.432
LTF
Ovotransferrin.
      
 0.411
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (64%) [HD]