STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRPEL2GrpE protein homolog 2, mitochondrial isoform X1. (216 aa)    
Predicted Functional Partners:
GRPEL1
GrpE protein homolog 1, mitochondrial.
  
 
 
0.934
FMC1
Protein FMC1 homolog.
    
   0.882
HSPA9
Stress-70 protein, mitochondrial isoform X2.
  
 0.882
PAM16
Mitochondrial import inner membrane translocase subunit TIM16.
   
 0.860
DNAJC19
Mitochondrial import inner membrane translocase subunit TIM14.
   
 0.850
DBT
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
  
 
 0.841
HSPE1
10 kDa heat shock protein, mitochondrial isoform X2.
  
 
 0.835
ENSSCAP00000008046
annotation not available
   
 0.829
ENSSCAP00000017269
annotation not available
   
 0.829
NDUFAF5
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5.
    
   0.828
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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