Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LLGL2Lethal(2) giant larvae protein homolog 2. (1038 aa)    
Predicted Functional Partners:
LLGL1
Lethal(2) giant larvae protein homolog 1 isoform X1.
  
 
 
0.984
PRKCI
Protein kinase C iota type isoform X1.
    
 0.976
PRKCZ
Protein kinase C zeta type isoform X1.
    
 0.976
PARD6A
Partitioning defective 6 homolog alpha.
    
 
 0.945
DLG1
Disks large homolog 1 isoform X14.
   
 0.942
PARD6B
Partitioning defective 6 homolog beta isoform X2.
    
 
 0.766
PARD6G
Partitioning defective 6 homolog gamma.
    
 
 0.752
ACBD5
Acyl-CoA-binding domain-containing protein 5 isoform X1.
      
 0.612
GLRX5
Glutaredoxin 5.
      
 0.607
VSTM4
V-set and transmembrane domain-containing protein 4 isoform X1.
      
 0.599
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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