STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCYOX1LPrenylcysteine oxidase-like. (537 aa)    
Predicted Functional Partners:
ENSSCAP00000022004
annotation not available
   
  
 0.534
ENSSCAP00000022435
annotation not available
      
 0.528
SLC35E4
Solute carrier family 35, member E4.
      
 0.512
FOXRED2
FAD-dependent oxidoreductase domain-containing protein 2.
      
 0.470
ENSSCAP00000007740
annotation not available
      
 0.470
PGK1
Phosphoglycerate kinase 1.
      
 0.469
PYURF
PIGY upstream reading frame.
      
 0.443
ERP27
Endoplasmic reticulum resident protein 27.
   
  
 0.439
SNX24
Sorting nexin-24 isoform X2.
      
 0.437
CNPY3
Protein canopy homolog 3.
      
 0.434
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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