FHL5 protein (Serinus canaria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

FHL5

Four and a half LIM domains protein 5 isoform X2. (292 aa)

Predicted Functional Partners:

DNAL4

0.668

CREM-2

0.655

WT1

0.612

GATA2

0.572

CNOT1

0.570

FKBP9

0.546

CNOT2

0.529

EMX2

0.527

GATA4

0.513

GATA5

0.513

Your Current Organism:

Serinus canaria

NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNOT1	CNOT2	ENSSCAP00000007377	ENSSCAP00000012197	CCR4-NOT transcription complex subunit 1 isoform X1.	CCR4-NOT transcription complex subunit 2.	0.999
CNOT1	FHL5	ENSSCAP00000007377	ENSSCAP00000001653	CCR4-NOT transcription complex subunit 1 isoform X1.	Four and a half LIM domains protein 5 isoform X2.	0.570
CNOT2	CNOT1	ENSSCAP00000012197	ENSSCAP00000007377	CCR4-NOT transcription complex subunit 2.	CCR4-NOT transcription complex subunit 1 isoform X1.	0.999
CNOT2	FHL5	ENSSCAP00000012197	ENSSCAP00000001653	CCR4-NOT transcription complex subunit 2.	Four and a half LIM domains protein 5 isoform X2.	0.529
CREM-2	FHL5	ENSSCAP00000011244	ENSSCAP00000001653	CAMP-responsive element modulator isoform X1.	Four and a half LIM domains protein 5 isoform X2.	0.655
DNAL4	FHL5	ENSSCAP00000006419	ENSSCAP00000001653	Dynein light chain 4, axonemal.	Four and a half LIM domains protein 5 isoform X2.	0.668
EMX2	FHL5	ENSSCAP00000019829	ENSSCAP00000001653	Homeobox protein EMX2 isoform X1.	Four and a half LIM domains protein 5 isoform X2.	0.527
EMX2	GATA2	ENSSCAP00000019829	ENSSCAP00000005909	Homeobox protein EMX2 isoform X1.	Endothelial transcription factor GATA-2.	0.721
EMX2	GATA4	ENSSCAP00000019829	ENSSCAP00000020135	Homeobox protein EMX2 isoform X1.	Transcription factor GATA-4 isoform X3.	0.622
EMX2	GATA5	ENSSCAP00000019829	ENSSCAP00000020689	Homeobox protein EMX2 isoform X1.	GATA binding protein 5.	0.622
FHL5	CNOT1	ENSSCAP00000001653	ENSSCAP00000007377	Four and a half LIM domains protein 5 isoform X2.	CCR4-NOT transcription complex subunit 1 isoform X1.	0.570
FHL5	CNOT2	ENSSCAP00000001653	ENSSCAP00000012197	Four and a half LIM domains protein 5 isoform X2.	CCR4-NOT transcription complex subunit 2.	0.529
FHL5	CREM-2	ENSSCAP00000001653	ENSSCAP00000011244	Four and a half LIM domains protein 5 isoform X2.	CAMP-responsive element modulator isoform X1.	0.655
FHL5	DNAL4	ENSSCAP00000001653	ENSSCAP00000006419	Four and a half LIM domains protein 5 isoform X2.	Dynein light chain 4, axonemal.	0.668
FHL5	EMX2	ENSSCAP00000001653	ENSSCAP00000019829	Four and a half LIM domains protein 5 isoform X2.	Homeobox protein EMX2 isoform X1.	0.527
FHL5	FKBP9	ENSSCAP00000001653	ENSSCAP00000013552	Four and a half LIM domains protein 5 isoform X2.	Peptidyl-prolyl cis-trans isomerase FKBP9.	0.546
FHL5	GATA2	ENSSCAP00000001653	ENSSCAP00000005909	Four and a half LIM domains protein 5 isoform X2.	Endothelial transcription factor GATA-2.	0.572
FHL5	GATA4	ENSSCAP00000001653	ENSSCAP00000020135	Four and a half LIM domains protein 5 isoform X2.	Transcription factor GATA-4 isoform X3.	0.513
FHL5	GATA5	ENSSCAP00000001653	ENSSCAP00000020689	Four and a half LIM domains protein 5 isoform X2.	GATA binding protein 5.	0.513
FHL5	WT1	ENSSCAP00000001653	ENSSCAP00000010389	Four and a half LIM domains protein 5 isoform X2.	Wilms tumor protein isoform X1.	0.612