Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOCADFocadhesin. (1803 aa)    
Predicted Functional Partners:
AVEN
Cell death regulator Aven.
    
 
 0.895
HACD4
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X1.
      
 0.608
ENSSCAP00000007279
5-formyltetrahydrofolate cyclo-ligase isoform X1.
      
 0.539
ANAPC15
Anaphase-promoting complex subunit 15 isoform X1.
      
 0.528
TMEM209
Transmembrane protein 209.
      
 0.484
VSIG10
V-set and immunoglobulin domain containing 10.
      
 0.471
PCNP
PEST proteolytic signal-containing nuclear protein.
      
 0.470
SCN2B
Voltage-gated sodium channel type II beta.
    
   0.469
TTC37
Tetratricopeptide repeat protein 37.
   
  
 0.439
ST6GALNAC1
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7A).
      
 0.435
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.