STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001665annotation not available (101 aa)    
Predicted Functional Partners:
ENSSCAP00000000578
annotation not available
 
      0.742
MEIS1
Homeobox protein Meis1 isoform X1.
   
 0.592
ILF3
Interleukin enhancer binding factor 3.
     
  0.583
HOXC6
Homeobox C6.
   
 
 0.578
FGG
Fibrinogen gamma chain.
      
 0.447
BDNF
Brain-derived neurotrophic factor isoform X2.
      
 0.441
ENSSCAP00000011931
Homeobox protein Hox-C9-like.
   
 
 0.440
ENSSCAP00000000588
annotation not available
    
 0.438
PBX1
LOW QUALITY PROTEIN: pre-B-cell leukemia transcription factor 1.
    
 0.438
PBX3
Pre-B-cell leukemia transcription factor 3.
    
 0.438
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.