STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN10UBX domain-containing protein 10. (192 aa)    
Predicted Functional Partners:
UBXN6
UBX domain-containing protein 6.
    
 
 0.965
UBXN2A
UBX domain-containing protein 2A.
    
 
 0.965
NSFL1C
UBX domain-containing protein 1.
    
 
 0.955
ASPSCR1
Tether containing UBX domain for GLUT4 isoform X1.
    
 
 0.939
UFD1
Ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1.
    
 
 0.930
IFT74
Intraflagellar transport 74.
    
 
 0.930
IFT88
Intraflagellar transport protein 88 homolog isoform X1.
    
   0.929
TTC26
Intraflagellar transport protein 56 isoform X2.
    
   0.929
UBXN2B
UBX domain protein 2B.
    
 
 0.866
ENSSCAP00000004019
annotation not available
    
 
 0.854
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.