STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAW1Dynein assembly factor with WDR repeat domains 1. (396 aa)    
Predicted Functional Partners:
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.
   
 0.851
PRPF6
Pre-mRNA-processing factor 6.
   
 0.742
PRPF8
Pre-mRNA-processing-splicing factor 8.
   
 0.728
SNRNP200
LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase.
   
 0.728
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.721
IQCA1
IQ motif containing with AAA domain 1.
   
  
 0.714
TEKT1
Tektin-1 isoform X1.
   
  
 0.713
DNAAF4
Dyslexia susceptibility 1 candidate gene 1 protein.
   
  
 0.704
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
  0.694
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.690
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.