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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAW1Dynein assembly factor with WDR repeat domains 1. (396 aa)    
Predicted Functional Partners:
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.
   
 0.915
PRPF6
Pre-mRNA-processing factor 6.
   
 0.875
SNRNP200
LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase.
   
 0.872
PRPF8
Pre-mRNA-processing-splicing factor 8.
   
 0.869
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.861
LSM8
LSM8 homolog, U6 small nuclear RNA associated isoform X1.
   
 0.838
LSM7
U6 snRNA-associated Sm-like protein LSm7.
    
 0.829
SNU13
U4/U6 small nuclear ribonucleoprotein SNU13.
   
 0.823
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.821
SF3A1
Splicing factor 3A subunit 1.
   
 0.818
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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