STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC24A2Solute carrier family 24 (sodium/potassium/calcium exchanger), member 2. (647 aa)    
Predicted Functional Partners:
PDE6C
Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' isoform X1.
      
 0.613
PDE6H
Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.
      
 0.594
GNG11
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.
      
 0.528
REEP1
Receptor expression-enhancing protein 1 isoform X1.
      
 0.511
ACP2
Lysosomal acid phosphatase.
      
 0.496
GUCA1A
Guanylyl cyclase-activating protein 1.
      
 0.486
PDE6B
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta.
   
  
 0.480
CNGA1
LOW QUALITY PROTEIN: cGMP-gated cation channel alpha-1.
   
 
 0.475
GUCA1C
Guanylate cyclase activator 1C.
      
 0.471
LOC103823301
Green-sensitive opsin.
   
  
 0.446
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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