STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIK3R4Phosphoinositide-3-kinase, regulatory subunit 4. (1361 aa)    
Predicted Functional Partners:
ATG14
Beclin 1-associated autophagy-related key regulator.
    
 0.999
BECN1
Beclin-1.
    
 0.999
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 0.999
UVRAG
UV radiation resistance-associated gene protein.
    
 0.999
RUBCN
Run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X5.
    
 
 0.962
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
   
 0.922
ULK1
Serine/threonine-protein kinase ULK1 isoform X4.
    
 0.918
ULK2
Serine/threonine-protein kinase ULK2.
    
 0.916
NRBF2
Nuclear receptor-binding factor 2.
    
 0.873
ATG101
Autophagy-related protein 101 isoform X1.
     
 0.868
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.