Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001709annotation not available (53 aa)    
Predicted Functional Partners:
GBF1
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1.
    
 0.741
COPB1
Coatomer subunit beta.
   
 0.714
COPB2
Coatomer subunit beta' isoform X1.
   
 0.698
ARFGAP1
ADP-ribosylation factor GTPase-activating protein 1 isoform X2.
   
 0.685
ARCN1
Coatomer subunit delta.
   
 0.677
ENSSCAP00000009132
annotation not available
   
 0.656
COPA
Coatomer protein complex subunit alpha.
   
 0.656
PI4KB
LOW QUALITY PROTEIN: phosphatidylinositol 4-kinase beta.
    
 0.655
COPE
Coatomer protein complex subunit epsilon.
   
 0.646
AP1G1
AP-1 complex subunit gamma-1 isoform X1.
    
 0.632
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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