STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPS6LOW QUALITY PROTEIN: 40S ribosomal protein S6. (249 aa)    
Predicted Functional Partners:
RPS3
Small subunit ribosomal protein S3e.
   
 0.999
RPS8
Small subunit ribosomal protein S8e.
   
 0.999
RPS9
Small subunit ribosomal protein S9e.
   
 0.999
LOC103825821
Small subunit ribosomal protein S20e.
   
 0.999
RPSA
Small subunit ribosomal protein SAe.
   
 0.999
RPS24
40S ribosomal protein S24 isoform X4.
  
 0.999
RPS11
Small subunit ribosomal protein S11e.
   
 0.999
RPS13
Small subunit ribosomal protein S13e.
  
 0.999
RPS2
Small subunit ribosomal protein S2e.
   
 0.999
RPS15
Small subunit ribosomal protein S15e.
   
 0.999
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.