STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PFDN4Prefoldin subunit 4. (135 aa)    
Predicted Functional Partners:
VBP1
Prefoldin subunit 3 isoform X2.
   
 0.996
PFDN1
Prefoldin subunit 1.
   
 0.995
PDRG1
P53 and DNA damage-regulated protein 1.
    
 0.984
TBCD
LOW QUALITY PROTEIN: tubulin-specific chaperone D.
    
 
 0.844
KATNB1
Katanin p80 WD40 repeat-containing subunit B1 isoform X1.
    
   0.830
CCT2
T-complex protein 1 subunit beta.
   
 0.816
CCT5
T-complex protein 1 subunit epsilon.
   
 0.811
CCT4
LOW QUALITY PROTEIN: T-complex protein 1 subunit delta.
   
 0.806
CCT7
T-complex protein 1 subunit eta isoform X1.
   
 0.803
TCP1
T-complex protein 1 subunit alpha.
   
 0.784
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.