Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AGFG1ArfGAP with FG repeats 1. (454 aa)    
Predicted Functional Partners:
VAMP7
Vesicle-associated membrane protein 7 isoform X1.
    
 0.920
EPS15
Epidermal growth factor receptor substrate 15 isoform X1.
    
 0.810
EPS15L1
Epidermal growth factor receptor pathway substrate 15 like 1.
    
 0.810
ITSN2
Intersectin-2 isoform X1.
    
 0.740
ACAP2
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X1.
      
 0.686
FAM126B
Protein FAM126B isoform X1.
      
 0.683
ITSN1
Intersectin-1 isoform X1.
    
 0.670
MEAK7
MTOR-associated protein MEAK7.
      
 0.642
RAB1A
Ras-related protein Rab-1A.
   
  
 0.631
STON2
Stonin-2 isoform X1.
     
 0.626
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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