STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP2C1Calcium-transporting ATPase type 2C member 1 isoform X2. (955 aa)    
Predicted Functional Partners:
TMEM165
Ca2+/H+ antiporter, TMEM165/GDT1 family.
   
 
 0.587
ETHE1
LOW QUALITY PROTEIN: persulfide dioxygenase ETHE1, mitochondrial.
   
  
 0.564
ATP2B4
ATPase plasma membrane Ca2+ transporting 4.
  
 
0.507
ATP2B2
Plasma membrane calcium-transporting ATPase 2.
  
 
0.503
ATP2B1
Plasma membrane calcium-transporting ATPase 1 isoform X1.
  
 
0.500
ATP1B3
Sodium/potassium-transporting ATPase subunit beta-3.
   
 0.460
SLC11A1
Solute carrier family 11 member 1.
   
 0.455
TMEM108
Transmembrane protein 108 isoform X3.
      
 0.444
ADAM10
Disintegrin and metalloproteinase domain-containing protein 10.
   
 0.426
ATP1B1
Sodium/potassium-transporting ATPase subunit beta-1 isoform X1.
   
 0.417
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.