STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001731annotation not available (76 aa)    
Predicted Functional Partners:
FH
Fumarate hydratase, mitochondrial isoform X2.
  
 
 0.659
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
  
 
 0.626
HACL1
2-hydroxyacyl-CoA lyase 1.
  
 0.611
MDH2
Malate dehydrogenase, mitochondrial.
  
 0.566
SUCLG1
LOW QUALITY PROTEIN: succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial.
  
 
 0.539
PGAM5
Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1.
    
 0.537
HSPD1
60 kDa heat shock protein, mitochondrial.
  
 0.527
BCKDHA
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial.
  
 
 0.523
PDHB
Pyruvate dehydrogenase E1 component subunit beta, mitochondrial.
  
 
 0.520
LDHA
L-lactate dehydrogenase A chain.
  
 0.516
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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