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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001738annotation not available (257 aa)    
Predicted Functional Partners:
PEMT
Phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase.
   
  
 0.572
ARHGEF10L
Rho guanine nucleotide exchange factor 10 like.
      
 0.552
AFMID
Kynurenine formamidase.
   
  
 0.544
RPS24
40S ribosomal protein S24 isoform X4.
      
 0.540
MYO1B
Unconventional myosin-Ib isoform X4.
      
 0.538
DIABLO
Diablo homolog, mitochondrial isoform X1.
      
 0.509
TXNDC16
Thioredoxin domain-containing protein 16.
      
 0.479
NIPAL2
NIPA like domain containing 2.
      
 0.479
SF3B1
Splicing factor 3B subunit 1 isoform X1.
      
 0.461
GPN1
GPN-loop GTPase 1.
      
 0.455
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.