STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001740annotation not available (125 aa)    
Predicted Functional Partners:
TUBB
Tubulin beta-7 chain.
 
     0.896
WDR90
WD repeat-containing protein 90 isoform X3.
   
 0.719
DCLK1-2
Serine/threonine-protein kinase DCLK1 isoform X1.
    
 
 0.666
DCLK1
Serine/threonine-protein kinase DCLK1-like.
    
 
 0.666
TUBA8
Tubulin alpha-8 chain.
 
0.636
TUBA1C
LOW QUALITY PROTEIN: tubulin alpha-1A chain.
 
0.636
LOC103815242
Tubulin alpha-3 chain isoform X1.
 
0.634
LOC103822357
Tubulin alpha-8 chain.
  
0.633
ENSSCAP00000018683
annotation not available
  
0.630
TUBAL3
Tubulin alpha chain-like 3 isoform X2.
  
0.629
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.