STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001740annotation not available (125 aa)    
Predicted Functional Partners:
TUBB
Tubulin beta-7 chain.
 
     0.896
ENSSCAP00000014214
annotation not available
   
 0.685
NME8
Thioredoxin domain-containing protein 3.
   
 0.685
WDR90
WD repeat-containing protein 90 isoform X3.
   
 0.604
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.572
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.564
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2 isoform X2.
   
 0.563
TUBA8
Tubulin alpha-8 chain.
   
 0.562
LOC103822357
Tubulin alpha-8 chain.
   
 0.562
LOC103815242
Tubulin alpha-3 chain isoform X1.
   
 0.562
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.