Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MRPL44LOW QUALITY PROTEIN: 39S ribosomal protein L44, mitochondrial. (304 aa)    
Predicted Functional Partners:
MRPL20
39S ribosomal protein L20, mitochondrial.
  
 0.974
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
 0.969
MRPL50
39S ribosomal protein L50, mitochondrial isoform X1.
   
 0.967
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 0.967
MRPL28
Mitochondrial ribosomal protein L28.
   
  0.966
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 0.966
MRPL3
39S ribosomal protein L3, mitochondrial.
   
 0.960
MRPL13
39S ribosomal protein L13, mitochondrial.
   
 
 0.960
MRPL39
39S ribosomal protein L39, mitochondrial.
  
 
 0.957
MRPL43
39S ribosomal protein L43, mitochondrial.
   
 
 0.956
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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