STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL44LOW QUALITY PROTEIN: 39S ribosomal protein L44, mitochondrial. (304 aa)    
Predicted Functional Partners:
MRPL43
39S ribosomal protein L43, mitochondrial.
   
 
 0.934
MRPL20
39S ribosomal protein L20, mitochondrial.
  
 
 0.932
MRPL13
39S ribosomal protein L13, mitochondrial.
   
 
 0.930
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
 
 0.910
MRPL39
39S ribosomal protein L39, mitochondrial.
  
 
 0.909
MRPL19
39S ribosomal protein L19, mitochondrial.
  
 
 0.908
MRPS9
28S ribosomal protein S9, mitochondrial.
   
 
 0.903
MRPL27
39S ribosomal protein L27, mitochondrial.
  
 
 0.902
MRPL18
39S ribosomal protein L18, mitochondrial.
   
 
 0.900
MRPL50
39S ribosomal protein L50, mitochondrial isoform X1.
   
 
 0.896
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.