STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC66A1Solute carrier family 66 (lysosomal lysine-arginine transporter), member 1. (304 aa)    
Predicted Functional Partners:
CTNS
Cystinosin.
    
 
 0.864
SLC38A9
Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 9.
      
 0.689
WDR41
WD repeat-containing protein 41.
      
 0.610
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
  
 0.531
ARPC2
Actin related protein 2/3 complex, subunit 2.
      
 0.529
UNC50
Protein unc-50 homolog.
      
 0.528
ELP2
Elongator acetyltransferase complex subunit 2.
     
 0.505
SNX17
Sorting nexin-17 isoform X2.
      
 0.498
SMCR8
Guanine nucleotide exchange protein SMCR8 isoform X1.
   
  
 0.485
GATB
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B.
      
 0.471
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.