Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103823994Scale keratin-like. (130 aa)    
Predicted Functional Partners:
MYSM1
Histone H2A deubiquitinase MYSM1.
    
 0.756
ITSN2
Intersectin-2 isoform X1.
    
 0.647
ENSSCAP00000014214
annotation not available
   
 0.580
NME8
Thioredoxin domain-containing protein 3.
   
 0.580
ARPC2
Actin related protein 2/3 complex, subunit 2.
   
 0.535
WDR1
WD repeat-containing protein 1.
   
 0.530
ACTL6A
Actin-like protein 6A.
   
 0.530
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.528
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
    
 0.528
ARPC3
Actin related protein 2/3 complex, subunit 3.
   
 0.517
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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